NAME gtophase - Computes an orbital phase for each event in input event file(s), and writes it to a FITS column in the file(s). USAGE gtophase evfile scfile psrdbfile psrname ra dec DESCRIPTION This tool operates on input event file(s) to compute an orbital phase for a photon arrival time of each event, and writes it to, by default, PULSE_PHASE column of the event file(s). If necessary, this tool reads the spacecraft orbit file and performs the barycentric correction and the binary demodulation to each photon arrival time on the fly. PARAMETERS evfile [file name] Name of input event file, event file format or equivalent. scfile [file name] Name of input spacecraft data file, S/C file format or equivalent. psrdbfile [file name] Name of pulsar ephemerides database file, in Fermi (formerly GLAST) D4 FITS format (See PULSAR EPHEMERIS DATABASE FILE). Multiple files may be combined by listing them in a text file, one per line, and supplying the list file name preceded by an @ sign. If psrdbfile is NONE (case-insensitive), no ephemeris is loaded from a file. psrname = ANY [string] Name of the pulsar, used to select only ephemerides valid for a particular pulsar. ra [double] Right Ascension of point source in degrees for which to perform the barycentric correction. dec [double] Declination of point source in degrees for which to perform the barycentric correction. (solareph = JPL DE405) [enumerated string (JPL DE200|JPL DE405)] Solar system ephemeris for the barycentric correction. (matchsolareph = ALL) [enumerated string (NONE|EVENT|PSRDB|ALL)] String that controls whether to use the name of the solar system ephemeris given by the solareph parameter to check the input event data file and to select ephemerides in the pulsar database. If matchsolareph is EVENT, all the input event files are required to use the same solar system ephemeris for the barycentric correction as the one given by the solareph parameter, and an error will be generated if otherwise. Such an error may occur when an input event data file has already been applied the barycentric correction with a different solar system ephemeris. If matchsolareph is PSRDB, the string given by the solareph parameter is used to select the ephemerides. If matchsolareph is ALL, both actions for the EVENT option and the PSRDB option will be taken. If matchsolareph is NONE, no selection will be performed. (angtol = 1.e-8) [double] Angular tolerance in degrees in comparison of two source positions, one for which the barycentric correction is performed, and another given by RA_NOM and DEC_NOM header keyword of an event file to which the barycentric correction has already been applied. This parameter only has effect if the barycentric correction has been applied to an input event data file. If the two source positions are separate from each other by this amount or less, then they will be considered to be the same position. Otherwise an error will be generated. The sign of the parameter value is ignored. For example, setting angtol=-1.0 results in giving angular tolerance of 1 degree. (evtable = EVENTS) [string] Name of the FITS table containing the event data. (timefield = TIME) [string] Name of the field containing the time values for temporal analysis. (sctable = SC_DATA) [string] Name of the FITS table containing the spacecraft data. (ophasefield = ORBITAL_PHASE) [string] Name of the output column to contain the assigned orbital phase. (ophaseoffset = 0.) [double] Global offset applied to all assigned orbital phases. (leapsecfile = DEFAULT) [file name] Name of the file containing the name of the leap second table, in OGIP-compliant leap second table format. If leapsecfile is the string DEFAULT, the default leap-second file (leapsec.fits), which is distributed with the extFiles package, will be used. (reportephstatus = yes) [bool] If reportephstatus is yes, the application will examine the input pulsar ephemeris database, and report findings which may affect the requested ephemeris computations. If reportephstatus is no, it will not report any ephemeris status. (srcposition = USER) [string] Specify the input of source position for arrival time corrections. The pulsar ephemerides can be given by a "USER" or can be found in a database file ("DB"). (strict = no) [bool] If set to "yes", the tool only chooses ephemeris if the given time is in validity range. (chatter = 2) [integer, min=0, max=4] This parameter fixes the output verbosity: no screen output (0), nominal screen output (2), maximum verbosity (4). (clobber = yes) [boolean] Overwrite or do not overwrite existing output files. (debug = no) [boolean] Activate debugging mode. When debug is "no", all exceptions that are not caught and handled by individual tool-specific code are caught by a top-level exception handler that displays information about the exception and then exits. When debug is "yes", such exceptions are not caught by the top level code. Instead the tool produces a segmentation violation, which is more useful for debugging. When debugging mode is enabled, the tool produces more verbose output describing any errors or exceptions that are encountered. (gui = no) [boolean] Graphical user Interface (GUI) mode activated if "yes" is specified. (mode = ql) [string] Mode of automatic parameters. EXAMPLES This tool automatically extracts one or more ephemerides from an existing pulsar ephemerides database file. Unlike the similar tool gtpphase, there is no option for entering orbital ephemerides manually. This tool does not produce a separate output file, but operates directly on the input file in place. If execution is successful, the tool produces no textual output. > gtophase evfile=fakepulsar_event.fits scfile=simscdata_1week.fits \ psrdbfile=bogus_pulsardb.fits psrname="PSR J1834-0010" \ ra=278.571942 dec=-0.180347 PULSAR EPHEMERIS DATABASE FILE A pulsar ephemeris database file is a FITS file or a text file in a Fermi-specific format, and contains a set of pulsar ephemerides to be used in a temporal analysis of Fermi data. When so specified, the pulsar analysis tools in Fermi Science Tools load pulsar ephemerides from pulsar ephemeris database files, and use them in their tasks. A pulsar ephemeris database file can be created, filtered, and combined by the gtpulsardb tool. Also, pulsar ephemerides for the Fermi LAT pulsars and timing models associated with various Fermi publications are available at the following web page. http://fermi.gsfc.nasa.gov/ssc/data/access/lat/ephems/ SEE ALSO gtpphase, gtpulsardb