The Fermi data released to the scientific community is governed by the data policy. The released instrument data for the GBM, along with LAT source lists, can be accessed through the Browse interface specific to Fermi. LAT photon data can be accessed through the LAT data server.
The FITS files can also be downloaded from the Fermi FTP site. The file version number is the 'xx' in the characters before the extension in each filename; you should keep track of the version numbers of files you analyze since the instrument teams may update them.
The analysis tools that are currently available to analyze GBM data, and documentation of the analysis system, are available here.
Note that the LAT and GBM data are accompanied by caveats about their use.